HL_9GUL_012

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GCGGACUGUCCCCAGUGCGC

Length

20 nucleotides

Bulged bases

9GUL|1|L5|G|1178, 9GUL|1|L5|U|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|G|1171
9GUL|1|L5|C|1172
9GUL|1|L5|G|1173
9GUL|1|L5|G|1174
9GUL|1|L5|A|1175
9GUL|1|L5|C|1176
9GUL|1|L5|U|1177
9GUL|1|L5|G|1178
9GUL|1|L5|U|1179
9GUL|1|L5|C|1180
9GUL|1|L5|C|1181
9GUL|1|L5|C|1182
9GUL|1|L5|C|1183
9GUL|1|L5|A|1184
9GUL|1|L5|G|1185
9GUL|1|L5|U|1186
9GUL|1|L5|G|1187
9GUL|1|L5|C|1188
9GUL|1|L5|G|1189
9GUL|1|L5|C|1190

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

Ribosomal protein uL16-like