HL_9GUL_024

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UUGGGGCCGAAACGAUCUCA

Length

20 nucleotides

Bulged bases

9GUL|1|L5|U|1757, 9GUL|1|L5|A|1765, 9GUL|1|L5|A|1766, 9GUL|1|L5|A|1767, 9GUL|1|L5|G|1769

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|U|1756
9GUL|1|L5|U|1757
9GUL|1|L5|G|1758
9GUL|1|L5|G|1759
9GUL|1|L5|G|1760
9GUL|1|L5|G|1761
9GUL|1|L5|C|1762
9GUL|1|L5|C|1763
9GUL|1|L5|G|1764
9GUL|1|L5|A|1765
9GUL|1|L5|A|1766
9GUL|1|L5|A|1767
9GUL|1|L5|C|1768
9GUL|1|L5|G|1769
9GUL|1|L5|A|1770
9GUL|1|L5|U|1771
9GUL|1|L5|C|1772
9GUL|1|L5|U|1773
9GUL|1|L5|C|1774
9GUL|1|L5|A|1775

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LD

60S ribosomal protein L5

Chain LI

Ribosomal protein uL16-like