HL_9GUL_044

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9GUL|1|L5|U|2874

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUL_044 not in the Motif Atlas

Homologous match to HL_9PN5_042

Geometric discrepancy: 0.0746

The information below is about HL_9PN5_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.7

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9GUL|1|L5|C|2872
9GUL|1|L5|U|2873
9GUL|1|L5|U|2874
9GUL|1|L5|C|2875
9GUL|1|L5|G|2876
9GUL|1|L5|G|2877

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lp

60S ribosomal protein L37a