HL_9GUL_063

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UUG(PSU)UCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUL_063 not in the Motif Atlas

Homologous match to HL_9PN5_061

Geometric discrepancy: 0.1068

The information below is about HL_9PN5_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02262.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

38

Unit IDs

9GUL|1|L5|U|4497
9GUL|1|L5|U|4498
9GUL|1|L5|G|4499
9GUL|1|L5|PSU|4500
9GUL|1|L5|U|4501
9GUL|1|L5|C|4502
9GUL|1|L5|A|4503

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3