HL_9GUQ_005

3D structure

PDB id

9GUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S PIC (Pre-Initiation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9GUQ|1|A|U|209, 9GUQ|1|A|C|210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUQ_005 not in the Motif Atlas

Homologous match to HL_5J7L_005

Geometric discrepancy: 0.4494

The information below is about HL_5J7L_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

9GUQ|1|A|C|207
9GUQ|1|A|U|208
9GUQ|1|A|U|209
9GUQ|1|A|C|210
9GUQ|1|A|G|211
9GUQ|1|A|G|212

Current chains

Chain A

16S ribosomal RNA

Nearby chains