HL_9GUQ_026

3D structure

PDB id

9GUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S PIC (Pre-Initiation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

9GUQ|1|A|C|1136, 9GUQ|1|A|C|1137, 9GUQ|1|A|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUQ_026 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.3157

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUQ|1|A|G|1134
9GUQ|1|A|U|1135
9GUQ|1|A|C|1136
9GUQ|1|A|C|1137
9GUQ|1|A|G|1138
9GUQ|1|A|G|1139
9GUQ|1|A|C|1140

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain J

30S ribosomal protein S9