HL_9GUS_011

3D structure

PDB id

9GUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex TEC resolved (30S only)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9GUS|1|A|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUS_011 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.1329

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

9GUS|1|A|C|419
9GUS|1|A|U|420
9GUS|1|A|U|421
9GUS|1|A|C|422
9GUS|1|A|G|423
9GUS|1|A|G|424

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

Small ribosomal subunit protein uS3

Chain E

Small ribosomal subunit protein uS4