HL_9GUT_012

3D structure

PDB id

9GUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (bS1 resolved)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9GUT|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUT_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2037

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9GUT|1|A|G|462
9GUT|1|A|U|463
9GUT|1|A|U|464
9GUT|1|A|A|465
9GUT|1|A|A|466
9GUT|1|A|U|467
9GUT|1|A|A|468
9GUT|1|A|C|469
9GUT|1|A|C|470

Current chains

Chain A

16S ribosomal RNA

Nearby chains