HL_9GUV_012

3D structure

PDB id

9GUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (closed-head)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9GUV|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUV_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1893

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9GUV|1|A|G|462
9GUV|1|A|U|463
9GUV|1|A|U|464
9GUV|1|A|A|465
9GUV|1|A|A|466
9GUV|1|A|U|467
9GUV|1|A|A|468
9GUV|1|A|C|469
9GUV|1|A|C|470

Current chains

Chain A

16S ribosomal RNA

Nearby chains