HL_9GUV_027

3D structure

PDB id

9GUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S mRNA delivery complex (closed-head)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

9GUV|1|A|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUV_027 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.3225

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9GUV|1|A|U|1165
9GUV|1|A|G|1166
9GUV|1|A|A|1167
9GUV|1|A|U|1168
9GUV|1|A|A|1169
9GUV|1|A|A|1170
9GUV|1|A|A|1171

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain B

30S ribosomal protein S1

Chain C

30S ribosomal protein S2

Chain V

30S ribosomal protein S21