HL_9GUW_018

3D structure

PDB id

9GUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-TEC (TEC in expressome position) Inactive state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GUW_018 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2436

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.3

Basepair signature

cWW-F

Number of instances in this motif group

5

Unit IDs

9GUW|1|A|C|840
9GUW|1|A|C|841
9GUW|1|A|U|842
9GUW|1|A|U|843
9GUW|1|A|G|844
9GUW|1|A|A|845
9GUW|1|A|G|846

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

30S ribosomal protein S2

Chain S

30S ribosomal protein S18