HL_9H1K_001

3D structure

PDB id

9H1K (explore in PDB, NAKB, or RNA 3D Hub)

Description

RlmR 23S rRNA methyltransferase from Thermus thermophilus in complex with rRNA and S-adenosyl-L-homocysteine (SAH)

Experimental method

X-RAY DIFFRACTION

Resolution

1.895 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

9H1K|1|C|U|2552, 9H1K|1|C|G|2553, 9H1K|1|C|C|2556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_26027.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

9H1K|1|C|C|2551
9H1K|1|C|U|2552
9H1K|1|C|G|2553
9H1K|1|C|U|2554
9H1K|1|C|U|2555
9H1K|1|C|C|2556
9H1K|1|C|G|2557

Current chains

Chain C

RNA (59-MER)

Nearby chains

Chain A

23S rRNA methyltransferase

Chain B

23S rRNA methyltransferase