HL_9H3R_024

3D structure

PDB id

9H3R (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_YjgA_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

4.12 Å

Loop

Sequence

AUGUUGGCUUAGAAGCAGCCAUCAUU

Length

26 nucleotides

Bulged bases

9H3R|1|A|U|1061, 9H3R|1|A|U|1065, 9H3R|1|A|U|1066, 9H3R|1|A|A|1067, 9H3R|1|A|G|1068, 9H3R|1|A|A|1070, 9H3R|1|A|A|1077, 9H3R|1|A|U|1078

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3R|1|A|A|1057
9H3R|1|A|U|1058
9H3R|1|A|G|1059
9H3R|1|A|U|1060
9H3R|1|A|U|1061
9H3R|1|A|G|1062
9H3R|1|A|G|1063
9H3R|1|A|C|1064
9H3R|1|A|U|1065
9H3R|1|A|U|1066
9H3R|1|A|A|1067
9H3R|1|A|G|1068
9H3R|1|A|A|1069
9H3R|1|A|A|1070
9H3R|1|A|G|1071
9H3R|1|A|C|1072
9H3R|1|A|A|1073
9H3R|1|A|G|1074
9H3R|1|A|C|1075
9H3R|1|A|C|1076
9H3R|1|A|A|1077
9H3R|1|A|U|1078
9H3R|1|A|C|1079
9H3R|1|A|A|1080
9H3R|1|A|U|1081
9H3R|1|A|U|1082

Current chains

Chain A

23S ribosomal RNA

Nearby chains