HL_9H3S_019

3D structure

PDB id

9H3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_YjgA_L22

Experimental method

ELECTRON MICROSCOPY

Resolution

4.16 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

9H3S|1|A|U|646

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3S_019 not in the Motif Atlas

Homologous match to HL_5J7L_153

Geometric discrepancy: 0.2529

The information below is about HL_5J7L_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13529.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9H3S|1|A|U|641
9H3S|1|A|U|642
9H3S|1|A|A|643
9H3S|1|A|A|644
9H3S|1|A|C|645
9H3S|1|A|U|646
9H3S|1|A|G|647

Current chains

Chain A

23S ribosomal RNA

Nearby chains