HL_9H3U_017

3D structure

PDB id

9H3U (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

9H3U|1|A|A|613, 9H3U|1|A|A|614, 9H3U|1|A|U|615

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3U_017 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3497

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

9H3U|1|A|C|611
9H3U|1|A|G|612
9H3U|1|A|A|613
9H3U|1|A|A|614
9H3U|1|A|U|615
9H3U|1|A|A|616
9H3U|1|A|G|617

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

Large ribosomal subunit protein uL4