HL_9H3Y_040

3D structure

PDB id

9H3Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor 50S_(L16)-

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

9H3Y|1|A|U|1729, 9H3Y|1|A|C|1732

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3Y_040 not in the Motif Atlas

Homologous match to HL_5J7L_214

Geometric discrepancy: 0.3958

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

9H3Y|1|A|C|1727
9H3Y|1|A|C|1728
9H3Y|1|A|U|1729
9H3Y|1|A|C|1730
9H3Y|1|A|G|1731
9H3Y|1|A|C|1732
9H3Y|1|A|G|1733

Current chains

Chain A

23S ribosomal RNA

Nearby chains