HL_9H4N_053

3D structure

PDB id

9H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPL13 (eL13)-mutant 80S ribosome from mouse

Experimental method

ELECTRON MICROSCOPY

Resolution

2.46 Å

Loop

Sequence

AGUAACUAUGACU

Length

13 nucleotides

Bulged bases

9H4N|1|A2|A|3416

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H4N|1|A2|A|3412
9H4N|1|A2|G|3413
9H4N|1|A2|U|3414
9H4N|1|A2|A|3415
9H4N|1|A2|A|3416
9H4N|1|A2|C|3417
9H4N|1|A2|U|3418
9H4N|1|A2|A|3419
9H4N|1|A2|U|3420
9H4N|1|A2|G|3421
9H4N|1|A2|A|3422
9H4N|1|A2|C|3423
9H4N|1|A2|U|3424

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain m2

Small subunit ribosomal RNA; SSU rRNA