HL_9H4N_081
3D structure
- PDB id
- 9H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RPL13 (eL13)-mutant 80S ribosome from mouse
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.46 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 9H4N|1|C2|A|82, 9H4N|1|C2|U|85
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H4N|1|C2|G|68
9H4N|1|C2|U|69
9H4N|1|C2|G|70
9H4N|1|C2|A|71
9H4N|1|C2|A|72
9H4N|1|C2|U|73
9H4N|1|C2|U|74
9H4N|1|C2|G|75
9H4N|1|C2|C|76
9H4N|1|C2|A|77
9H4N|1|C2|G|78
9H4N|1|C2|G|79
9H4N|1|C2|A|80
9H4N|1|C2|C|81
9H4N|1|C2|A|82
9H4N|1|C2|C|83
9H4N|1|C2|A|84
9H4N|1|C2|U|85
9H4N|1|C2|U|86
9H4N|1|C2|G|87
9H4N|1|C2|A|88
9H4N|1|C2|U|89
9H4N|1|C2|C|90
Current chains
- Chain C2
- 5.8S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain S2
- Large ribosomal subunit protein uL24
- Chain b2
- Large ribosomal subunit protein uL29
- Chain d2
- Large ribosomal subunit protein eL37
- Chain f2
- Large ribosomal subunit protein eL39
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