HL_9H4N_102

3D structure

PDB id

9H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPL13 (eL13)-mutant 80S ribosome from mouse

Experimental method

ELECTRON MICROSCOPY

Resolution

2.46 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

9H4N|1|m2|U|894

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H4N|1|m2|U|887
9H4N|1|m2|A|888
9H4N|1|m2|U|889
9H4N|1|m2|U|890
9H4N|1|m2|U|891
9H4N|1|m2|U|892
9H4N|1|m2|G|893
9H4N|1|m2|U|894
9H4N|1|m2|U|895
9H4N|1|m2|G|896
9H4N|1|m2|G|897
9H4N|1|m2|U|898
9H4N|1|m2|U|899
9H4N|1|m2|U|900
9H4N|1|m2|U|901
9H4N|1|m2|C|902
9H4N|1|m2|G|903

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain w2

Small ribosomal subunit protein uS17