HL_9H55_009
3D structure
- PDB id
- 9H55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1 and TFB1M (state N3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUGUAAAAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H55_009 not in the Motif Atlas
- Geometric match to HL_8B0X_014
- Geometric discrepancy: 0.2585
- The information below is about HL_8B0X_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9H55|1|A|U|989
9H55|1|A|U|990
9H55|1|A|G|991
9H55|1|A|U|992
9H55|1|A|A|993
9H55|1|A|A|994
9H55|1|A|A|995
9H55|1|A|A|996
9H55|1|A|A|997
9H55|1|A|A|998
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 5
- Dimethyladenosine transferase 1, mitochondrial
- Chain I
- 28S ribosomal protein S11, mitochondrial
- Chain Q
- Small ribosomal subunit protein bS21m
- Chain a
- Putative ribosome-binding factor A, mitochondrial
Coloring options: