HL_9H8G_009

3D structure

PDB id

9H8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 5 30S-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

2.09 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9H8G|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H8G_009 not in the Motif Atlas

Geometric match to HL_3U4M_001

Geometric discrepancy: 0.1034

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

9H8G|1|A|C|342
9H8G|1|A|U|343
9H8G|1|A|A|344
9H8G|1|A|C|345
9H8G|1|A|G|346
9H8G|1|A|G|347

Current chains

Chain A

16S rRNA fragment (1078-MER)

Nearby chains