HL_9H9H_012

3D structure

PDB id

9H9H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 1 30S-IF1-IF2-IF3-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9H9H|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H9H_012 not in the Motif Atlas

Geometric match to HL_9DFE_040

Geometric discrepancy: 0.2165

The information below is about HL_9DFE_040

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

9H9H|1|A|C|342
9H9H|1|A|U|343
9H9H|1|A|A|344
9H9H|1|A|C|345
9H9H|1|A|G|346
9H9H|1|A|G|347

Current chains

Chain A

16S RNA (1534-MER)

Nearby chains