HL_9H9H_032
3D structure
- PDB id
- 9H9H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex 1 30S-IF1-IF2-IF3-GE81112
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUGCAACUCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H9H_032 not in the Motif Atlas
- Geometric match to HL_4LFB_029
- Geometric discrepancy: 0.1213
- The information below is about HL_4LFB_029
- Detailed Annotation
- T-loop with 3 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_93658.1
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9H9H|1|A|C|1314
9H9H|1|A|U|1315
9H9H|1|A|G|1316
9H9H|1|A|C|1317
9H9H|1|A|A|1318
9H9H|1|A|A|1319
9H9H|1|A|C|1320
9H9H|1|A|U|1321
9H9H|1|A|C|1322
9H9H|1|A|G|1323
Current chains
- Chain A
- 16S RNA (1534-MER)
Nearby chains
- Chain M
- Small ribosomal subunit protein uS13
- Chain N
- Small ribosomal subunit protein uS14
- Chain S
- Small ribosomal subunit protein uS19
Coloring options: