HL_9H9H_034

3D structure

PDB id

9H9H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 1 30S-IF1-IF2-IF3-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9H9H|1|A|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H9H_034 not in the Motif Atlas

Geometric match to HL_8P9A_200

Geometric discrepancy: 0.2142

The information below is about HL_8P9A_200

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

9H9H|1|A|C|1449
9H9H|1|A|U|1450
9H9H|1|A|U|1451
9H9H|1|A|C|1452
9H9H|1|A|G|1453
9H9H|1|A|G|1454

Current chains

Chain A

16S RNA (1534-MER)

Nearby chains