HL_9H9J_022

3D structure

PDB id

9H9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 2 (BODY) 30S-IF1-IF3-tRNA-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

G(2MG)G(MA6)(MA6)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 2MG, MA6

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H9J_022 not in the Motif Atlas

Geometric match to HL_4LFB_032

Geometric discrepancy: 0.1413

The information below is about HL_4LFB_032

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

9H9J|1|A|G|1515
9H9J|1|A|2MG|1516
9H9J|1|A|G|1517
9H9J|1|A|MA6|1518
9H9J|1|A|MA6|1519
9H9J|1|A|C|1520

Current chains

Chain A

16S RNA (1078-MER)

Nearby chains

Chain Z

Translation initiation factor IF-3