HL_9HA2_010

3D structure

PDB id

9HA2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Alternative PET exit Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

9HA2|1|A|U|321, 9HA2|1|A|A|322

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA2_010 not in the Motif Atlas

Homologous match to HL_7A0S_011

Geometric discrepancy: 0.1684

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

9HA2|1|A|G|319
9HA2|1|A|A|320
9HA2|1|A|U|321
9HA2|1|A|A|322
9HA2|1|A|C|323

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

Large ribosomal subunit protein uL4