HL_9HA2_017

3D structure

PDB id

9HA2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Alternative PET exit Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

CCUUUUGUAUAAUG

Length

14 nucleotides

Bulged bases

9HA2|1|A|U|571, 9HA2|1|A|A|574

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA2|1|A|C|564
9HA2|1|A|C|565
9HA2|1|A|U|566
9HA2|1|A|U|567
9HA2|1|A|U|568
9HA2|1|A|U|569
9HA2|1|A|G|570
9HA2|1|A|U|571
9HA2|1|A|A|572
9HA2|1|A|U|573
9HA2|1|A|A|574
9HA2|1|A|A|575
9HA2|1|A|U|576
9HA2|1|A|G|577

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15

Chain Q

Large ribosomal subunit protein bL20

Chain R

Large ribosomal subunit protein bL21