HL_9HA2_042

3D structure

PDB id

9HA2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Alternative PET exit Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

9HA2|1|A|U|2797

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA2_042 not in the Motif Atlas

Geometric match to HL_4V9F_021

Geometric discrepancy: 0.16

The information below is about HL_4V9F_021

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

9HA2|1|A|U|2796
9HA2|1|A|U|2797
9HA2|1|A|U|2798
9HA2|1|A|A|2799

Current chains

Chain A

23S ribosomal RNA

Nearby chains