HL_9HA7_033

3D structure

PDB id

9HA7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.37 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

9HA7|1|A|A|1616, 9HA7|1|A|A|1618

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA7_033 not in the Motif Atlas

Homologous match to HL_5J7L_173

Geometric discrepancy: 0.45

The information below is about HL_5J7L_173

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

9HA7|1|A|C|1612
9HA7|1|A|G|1613
9HA7|1|A|A|1614
9HA7|1|A|C|1615
9HA7|1|A|A|1616
9HA7|1|A|C|1617
9HA7|1|A|A|1618
9HA7|1|A|G|1619

Current chains

Chain A

23S ribosomal RNA

Nearby chains