HL_9HFO_014

3D structure

PDB id

9HFO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translation-initiation state of human mitochondrial ribosome small subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAAAUCAACAAA

Length

12 nucleotides

Bulged bases

9HFO|1|A|A|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HFO|1|A|U|1115
9HFO|1|A|A|1116
9HFO|1|A|A|1117
9HFO|1|A|A|1118
9HFO|1|A|U|1119
9HFO|1|A|C|1120
9HFO|1|A|A|1121
9HFO|1|A|A|1122
9HFO|1|A|C|1123
9HFO|1|A|A|1124
9HFO|1|A|A|1125
9HFO|1|A|A|1126

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Small ribosomal subunit protein mS37

Chain B

28S ribosomal protein S2, mitochondrial

Chain D

28S ribosomal protein S5, mitochondrial

Chain E

28S ribosomal protein S6, mitochondrial

Chain S

28S ribosomal protein S23, mitochondrial