HL_9HMW_049

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

(PSU)UUAAUUAAAA

Length

11 nucleotides

Bulged bases

9HMW|1|A|A|2137, 9HMW|1|A|A|2138, 9HMW|1|A|U|2139, 9HMW|1|A|A|2143

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|A|PSU|2134
9HMW|1|A|U|2135
9HMW|1|A|U|2136
9HMW|1|A|A|2137
9HMW|1|A|A|2138
9HMW|1|A|U|2139
9HMW|1|A|U|2140
9HMW|1|A|A|2141
9HMW|1|A|A|2142
9HMW|1|A|A|2143
9HMW|1|A|A|2144

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AY

Large ribosomal subunit protein eL37z

Chain BQ

Large ribosomal subunit protein uL2z