HL_9HMW_053

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

U(OMC)UAAUUAG

Length

9 nucleotides

Bulged bases

9HMW|1|A|U|2296

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|A|U|2290
9HMW|1|A|OMC|2291
9HMW|1|A|U|2292
9HMW|1|A|A|2293
9HMW|1|A|A|2294
9HMW|1|A|U|2295
9HMW|1|A|U|2296
9HMW|1|A|A|2297
9HMW|1|A|G|2298

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain BI

Large ribosomal subunit protein uL14x/uL14z/uL14y

Chain h1

Small subunit ribosomal RNA; SSU rRNA