HL_9HMW_062

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|A|C|2839
9HMW|1|A|G|2840
9HMW|1|A|U|2841
9HMW|1|A|U|2842
9HMW|1|A|C|2843
9HMW|1|A|A|2844
9HMW|1|A|U|2845
9HMW|1|A|A|2846
9HMW|1|A|G|2847

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain BJ

Large ribosomal subunit protein uL16y

Chain Ga

Ubiquitin-ribosomal protein eL40z fusion protein