HL_9HMW_063

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

AGCAGAAU

Length

8 nucleotides

Bulged bases

9HMW|1|A|G|2897

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|A|A|2896
9HMW|1|A|G|2897
9HMW|1|A|C|2898
9HMW|1|A|A|2899
9HMW|1|A|G|2900
9HMW|1|A|A|2901
9HMW|1|A|A|2902
9HMW|1|A|U|2903

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain Ga

Ubiquitin-ribosomal protein eL40z fusion protein

Chain Ia

Large ribosomal subunit protein uL6z/uL6y