HL_9HQV_002
3D structure
- PDB id
- 9HQV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- CUCCUAUG
- Length
- 8 nucleotides
- Bulged bases
- 9HQV|1|SA|C|46, 9HQV|1|SA|C|47, 9HQV|1|SA|U|50
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HQV|1|SA|C|44
9HQV|1|SA|U|45
9HQV|1|SA|C|46
9HQV|1|SA|C|47
9HQV|1|SA|U|48
9HQV|1|SA|A|49
9HQV|1|SA|U|50
9HQV|1|SA|G|51
Current chains
- Chain SA
- SSU-1
Nearby chains
- Chain Bb
- Putative 30S ribosomal protein S5
- Chain Bh
- Putative 30S ribosomal protein S12
- Chain By
- Homeodomain-like containing protein
- Chain Bz
- mS45
- Chain Yd
- mS120
- Chain Ye
- mS121
- Chain Yf
- Macro domain-containing protein
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