HL_9HUQ_027

3D structure

PDB id

9HUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 47, with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

9HUQ|1|b|U|827, 9HUQ|1|b|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HUQ_027 not in the Motif Atlas

Homologous match to HL_7A0S_024

Geometric discrepancy: 0.1628

The information below is about HL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

9HUQ|1|b|U|826
9HUQ|1|b|U|827
9HUQ|1|b|U|828
9HUQ|1|b|A|829
9HUQ|1|b|G|830
9HUQ|1|b|G|831

Current chains

Chain b

23S rRNA

Nearby chains

Chain l

Large ribosomal subunit protein uL15