HL_9HUQ_054

3D structure

PDB id

9HUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 47, with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CCUUGAUGUGUAGGAUAGGUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUG

Length

84 nucleotides

Bulged bases

9HUQ|1|b|G|2112, 9HUQ|1|b|G|2123, 9HUQ|1|b|U|2130, 9HUQ|1|b|U|2131, 9HUQ|1|b|G|2144, 9HUQ|1|b|A|2147, 9HUQ|1|b|U|2149, 9HUQ|1|b|G|2159, 9HUQ|1|b|G|2162

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HUQ|1|b|C|2103
9HUQ|1|b|C|2104
9HUQ|1|b|U|2105
9HUQ|1|b|U|2106
9HUQ|1|b|G|2107
9HUQ|1|b|A|2108
9HUQ|1|b|U|2109
9HUQ|1|b|G|2110
9HUQ|1|b|U|2111
9HUQ|1|b|G|2112
9HUQ|1|b|U|2113
9HUQ|1|b|A|2114
9HUQ|1|b|G|2115
9HUQ|1|b|G|2116
9HUQ|1|b|A|2117
9HUQ|1|b|U|2118
9HUQ|1|b|A|2119
9HUQ|1|b|G|2120
9HUQ|1|b|G|2121
9HUQ|1|b|U|2122
9HUQ|1|b|G|2123
9HUQ|1|b|G|2124
9HUQ|1|b|G|2125
9HUQ|1|b|A|2126
9HUQ|1|b|G|2127
9HUQ|1|b|G|2128
9HUQ|1|b|C|2129
9HUQ|1|b|U|2130
9HUQ|1|b|U|2131
9HUQ|1|b|A|2132
9HUQ|1|b|G|2133
9HUQ|1|b|A|2134
9HUQ|1|b|A|2135
9HUQ|1|b|G|2136
9HUQ|1|b|U|2137
9HUQ|1|b|G|2138
9HUQ|1|b|U|2139
9HUQ|1|b|G|2140
9HUQ|1|b|G|2141
9HUQ|1|b|A|2142
9HUQ|1|b|C|2143
9HUQ|1|b|G|2144
9HUQ|1|b|C|2145
9HUQ|1|b|C|2146
9HUQ|1|b|A|2147
9HUQ|1|b|G|2148
9HUQ|1|b|U|2149
9HUQ|1|b|C|2150
9HUQ|1|b|U|2151
9HUQ|1|b|G|2152
9HUQ|1|b|C|2153
9HUQ|1|b|A|2154
9HUQ|1|b|U|2155
9HUQ|1|b|G|2156
9HUQ|1|b|G|2157
9HUQ|1|b|A|2158
9HUQ|1|b|G|2159
9HUQ|1|b|C|2160
9HUQ|1|b|C|2161
9HUQ|1|b|G|2162
9HUQ|1|b|A|2163
9HUQ|1|b|C|2164
9HUQ|1|b|C|2165
9HUQ|1|b|U|2166
9HUQ|1|b|U|2167
9HUQ|1|b|G|2168
9HUQ|1|b|A|2169
9HUQ|1|b|A|2170
9HUQ|1|b|A|2171
9HUQ|1|b|U|2172
9HUQ|1|b|A|2173
9HUQ|1|b|C|2174
9HUQ|1|b|C|2175
9HUQ|1|b|A|2176
9HUQ|1|b|C|2177
9HUQ|1|b|C|2178
9HUQ|1|b|C|2179
9HUQ|1|b|U|2180
9HUQ|1|b|U|2181
9HUQ|1|b|U|2182
9HUQ|1|b|A|2183
9HUQ|1|b|A|2184
9HUQ|1|b|U|2185
9HUQ|1|b|G|2186

Current chains

Chain b

23S rRNA

Nearby chains