HL_9HY6_061

3D structure

PDB id

9HY6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HY6|1|b|G|2303
9HY6|1|b|G|2304
9HY6|1|b|U|2305
9HY6|1|b|C|2306
9HY6|1|b|G|2307
9HY6|1|b|G|2308
9HY6|1|b|A|2309
9HY6|1|b|C|2310
9HY6|1|b|A|2311
9HY6|1|b|U|2312
9HY6|1|b|C|2313

Current chains

Chain b

23S rRNA

Nearby chains

Chain f

Large ribosomal subunit protein uL5