HL_9HYM_018
3D structure
- PDB id
- 9HYM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome with complexed filament nascent chain at length 34, with mRNA, P-site and A-site tRNAs, and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- ACACGUGGUAU
- Length
- 11 nucleotides
- Bulged bases
- 9HYM|1|b|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9HYM_018 not in the Motif Atlas
- Homologous match to HL_7A0S_013
- Geometric discrepancy: 0.3644
- The information below is about HL_7A0S_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.8
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9HYM|1|b|A|382
9HYM|1|b|C|383
9HYM|1|b|A|384
9HYM|1|b|C|385
9HYM|1|b|G|386
9HYM|1|b|U|387
9HYM|1|b|G|388
9HYM|1|b|G|389
9HYM|1|b|U|390
9HYM|1|b|A|391
9HYM|1|b|U|392
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL28
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