HL_9I14_013

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

CUUGGGAAUG

Length

10 nucleotides

Bulged bases

9I14|1|L5|G|294, 9I14|1|L5|A|295, 9I14|1|L5|A|296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|C|289
9I14|1|L5|U|290
9I14|1|L5|U|291
9I14|1|L5|G|292
9I14|1|L5|G|293
9I14|1|L5|G|294
9I14|1|L5|A|295
9I14|1|L5|A|296
9I14|1|L5|U|297
9I14|1|L5|G|298

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Lo

60S ribosomal protein L36a