HL_9I14_025

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9I14|1|L5|U|1596, 9I14|1|L5|A|1600, 9I14|1|L5|A|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|A|1593
9I14|1|L5|C|1594
9I14|1|L5|G|1595
9I14|1|L5|U|1596
9I14|1|L5|G|1597
9I14|1|L5|C|1598
9I14|1|L5|A|1599
9I14|1|L5|A|1600
9I14|1|L5|A|1601
9I14|1|L5|U|1602

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LP

60S ribosomal protein L17

Chain Lj

Large ribosomal subunit protein eL37