HL_9I14_053

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

UCAAACGGUAACG

Length

13 nucleotides

Bulged bases

9I14|1|L5|A|4214, 9I14|1|L5|C|4221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|U|4210
9I14|1|L5|C|4211
9I14|1|L5|A|4212
9I14|1|L5|A|4213
9I14|1|L5|A|4214
9I14|1|L5|C|4215
9I14|1|L5|G|4216
9I14|1|L5|G|4217
9I14|1|L5|U|4218
9I14|1|L5|A|4219
9I14|1|L5|A|4220
9I14|1|L5|C|4221
9I14|1|L5|G|4222

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29