HL_9I2D_002
3D structure
- PDB id
- 9I2D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- CUUAGGGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9I2D_002 not in the Motif Atlas
- Homologous match to HL_9MTS_102
- Geometric discrepancy: 0.1031
- The information below is about HL_9MTS_102
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9I2D|1|CP|C|30
9I2D|1|CP|U|31
9I2D|1|CP|U|32
9I2D|1|CP|A|33
9I2D|1|CP|G|34
9I2D|1|CP|G|35
9I2D|1|CP|G|36
9I2D|1|CP|U|37
9I2D|1|CP|G|38
Current chains
- Chain CP
- prolyl-tRNA
Nearby chains
- Chain CM
- CMV-staller mRNA with 18aa ARF1-linker
- Chain CR
- Eukaryotic peptide chain release factor subunit 1
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SQ
- 40S ribosomal protein S16
Coloring options: