HL_9I2D_048

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

UUUAAUUAAAA

Length

11 nucleotides

Bulged bases

9I2D|1|L5|A|3642, 9I2D|1|L5|A|3643, 9I2D|1|L5|U|3644, 9I2D|1|L5|A|3648

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|L5|U|3639
9I2D|1|L5|U|3640
9I2D|1|L5|U|3641
9I2D|1|L5|A|3642
9I2D|1|L5|A|3643
9I2D|1|L5|U|3644
9I2D|1|L5|U|3645
9I2D|1|L5|A|3646
9I2D|1|L5|A|3647
9I2D|1|L5|A|3648
9I2D|1|L5|A|3649

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CZ

nascent polypeptide 10aa ARF1-linker

Chain LA

60S ribosomal protein L8

Chain Lj

60S ribosomal protein L37