HL_9I2D_054

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

AGCCCCGAGGGGCU

Length

14 nucleotides

Bulged bases

9I2D|1|L5|C|4102, 9I2D|1|L5|G|4104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|L5|A|4098
9I2D|1|L5|G|4099
9I2D|1|L5|C|4100
9I2D|1|L5|C|4101
9I2D|1|L5|C|4102
9I2D|1|L5|C|4103
9I2D|1|L5|G|4104
9I2D|1|L5|A|4105
9I2D|1|L5|G|4106
9I2D|1|L5|G|4107
9I2D|1|L5|G|4108
9I2D|1|L5|G|4109
9I2D|1|L5|C|4110
9I2D|1|L5|U|4111

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LG

60S ribosomal protein L7a