HL_9I2D_091

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

GGACUCUUUCGAGGCC

Length

16 nucleotides

Bulged bases

9I2D|1|S2|A|536, 9I2D|1|S2|C|539, 9I2D|1|S2|U|542

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|S2|G|534
9I2D|1|S2|G|535
9I2D|1|S2|A|536
9I2D|1|S2|C|537
9I2D|1|S2|U|538
9I2D|1|S2|C|539
9I2D|1|S2|U|540
9I2D|1|S2|U|541
9I2D|1|S2|U|542
9I2D|1|S2|C|543
9I2D|1|S2|G|544
9I2D|1|S2|A|545
9I2D|1|S2|G|546
9I2D|1|S2|G|547
9I2D|1|S2|C|548
9I2D|1|S2|C|549

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Se

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein