HL_9I2E_025

3D structure

PDB id

9I2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human ribosome (combined translational states)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9I2E|1|L5|U|1596, 9I2E|1|L5|A|1600, 9I2E|1|L5|A|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2E|1|L5|A|1593
9I2E|1|L5|C|1594
9I2E|1|L5|G|1595
9I2E|1|L5|U|1596
9I2E|1|L5|G|1597
9I2E|1|L5|C|1598
9I2E|1|L5|A|1599
9I2E|1|L5|A|1600
9I2E|1|L5|A|1601
9I2E|1|L5|U|1602

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LP

60S ribosomal protein L17

Chain Lj

60S ribosomal protein L37