HL_9I2E_116

3D structure

PDB id

9I2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human ribosome (combined translational states)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GGUCGGCCCACGGC

Length

14 nucleotides

Bulged bases

9I2E|1|S2|G|1760, 9I2E|1|S2|U|1761, 9I2E|1|S2|C|1762, 9I2E|1|S2|G|1763, 9I2E|1|S2|G|1764, 9I2E|1|S2|C|1765, 9I2E|1|S2|C|1766, 9I2E|1|S2|C|1767, 9I2E|1|S2|A|1768, 9I2E|1|S2|C|1769, 9I2E|1|S2|G|1770, 9I2E|1|S2|G|1771

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2E|1|S2|G|1759
9I2E|1|S2|G|1760
9I2E|1|S2|U|1761
9I2E|1|S2|C|1762
9I2E|1|S2|G|1763
9I2E|1|S2|G|1764
9I2E|1|S2|C|1765
9I2E|1|S2|C|1766
9I2E|1|S2|C|1767
9I2E|1|S2|A|1768
9I2E|1|S2|C|1769
9I2E|1|S2|G|1770
9I2E|1|S2|G|1771
9I2E|1|S2|C|1772

Current chains

Chain S2

18S rRNA

Nearby chains