HL_9IOT_035

3D structure

PDB id

9IOT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CACUACGGUG

Length

10 nucleotides

Bulged bases

9IOT|1|A|U|1534, 9IOT|1|A|A|1535, 9IOT|1|A|C|1536

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9IOT|1|A|C|1531
9IOT|1|A|A|1532
9IOT|1|A|C|1533
9IOT|1|A|U|1534
9IOT|1|A|A|1535
9IOT|1|A|C|1536
9IOT|1|A|G|1537
9IOT|1|A|G|1538
9IOT|1|A|U|1539
9IOT|1|A|G|1540

Current chains

Chain A

23S rRNA

Nearby chains