HL_9ISV_003

3D structure

PDB id

9ISV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Enterococcus faecalis ROOL RNA monomer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

AGCAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9ISV_003 not in the Motif Atlas

Geometric match to HL_2OIU_003

Geometric discrepancy: 0.1516

The information below is about HL_2OIU_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9ISV|1|A|A|124
9ISV|1|A|G|125
9ISV|1|A|C|126
9ISV|1|A|A|127
9ISV|1|A|A|128
9ISV|1|A|U|129

Current chains

Chain A

RNA (580-MER)

Nearby chains